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@@ -1,189 +1,190 @@
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-#.rst:
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-# ExternalData
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-# ------------
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-#
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-# Manage data files stored outside source tree
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-#
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-# Use this module to unambiguously reference data files stored outside
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-# the source tree and fetch them at build time from arbitrary local and
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-# remote content-addressed locations. Functions provided by this module
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-# recognize arguments with the syntax ``DATA{<name>}`` as references to
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-# external data, replace them with full paths to local copies of those
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-# data, and create build rules to fetch and update the local copies.
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-#
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-# The ``DATA{}`` syntax is literal and the ``<name>`` is a full or relative path
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-# within the source tree. The source tree must contain either a real
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-# data file at ``<name>`` or a "content link" at ``<name><ext>`` containing a
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-# hash of the real file using a hash algorithm corresponding to ``<ext>``.
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-# For example, the argument ``DATA{img.png}`` may be satisfied by either a
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-# real ``img.png`` file in the current source directory or a ``img.png.md5``
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-# file containing its MD5 sum.
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-#
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-# The ``ExternalData_Expand_Arguments`` function evaluates ``DATA{}``
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-# references in its arguments and constructs a new list of arguments:
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-#
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-# .. code-block:: cmake
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-#
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-# ExternalData_Expand_Arguments(
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-# <target> # Name of data management target
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-# <outVar> # Output variable
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-# [args...] # Input arguments, DATA{} allowed
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-# )
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-#
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-# It replaces each ``DATA{}`` reference in an argument with the full path of
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-# a real data file on disk that will exist after the ``<target>`` builds.
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-#
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-# The ``ExternalData_Add_Test`` function wraps around the CMake
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-# :command:`add_test` command but supports ``DATA{}`` references in
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-# its arguments:
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-#
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-# .. code-block:: cmake
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-#
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-# ExternalData_Add_Test(
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-# <target> # Name of data management target
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-# ... # Arguments of add_test(), DATA{} allowed
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-# )
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-#
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-# It passes its arguments through ``ExternalData_Expand_Arguments`` and then
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-# invokes the :command:`add_test` command using the results.
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-#
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-# The ``ExternalData_Add_Target`` function creates a custom target to
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-# manage local instances of data files stored externally:
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-#
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-# .. code-block:: cmake
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-#
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-# ExternalData_Add_Target(
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-# <target> # Name of data management target
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-# )
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-#
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-# It creates custom commands in the target as necessary to make data
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-# files available for each ``DATA{}`` reference previously evaluated by
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-# other functions provided by this module. A list of URL templates may
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-# be provided in the variable ``ExternalData_URL_TEMPLATES`` using the
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-# placeholders ``%(algo)`` and ``%(hash)`` in each template. Data fetch
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-# rules try each URL template in order by substituting the hash
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-# algorithm name for ``%(algo)`` and the hash value for ``%(hash)``.
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-#
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-# The following hash algorithms are supported::
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-#
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-# %(algo) <ext> Description
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-# ------- ----- -----------
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-# MD5 .md5 Message-Digest Algorithm 5, RFC 1321
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-# SHA1 .sha1 US Secure Hash Algorithm 1, RFC 3174
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-# SHA224 .sha224 US Secure Hash Algorithms, RFC 4634
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-# SHA256 .sha256 US Secure Hash Algorithms, RFC 4634
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-# SHA384 .sha384 US Secure Hash Algorithms, RFC 4634
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-# SHA512 .sha512 US Secure Hash Algorithms, RFC 4634
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-#
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-# Note that the hashes are used only for unique data identification and
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-# download verification.
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-#
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-# Example usage:
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-#
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-# .. code-block:: cmake
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-#
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-# include(ExternalData)
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-# set(ExternalData_URL_TEMPLATES "file:///local/%(algo)/%(hash)"
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-# "file:////host/share/%(algo)/%(hash)"
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-# "http://data.org/%(algo)/%(hash)")
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-# ExternalData_Add_Test(MyData
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-# NAME MyTest
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-# COMMAND MyExe DATA{MyInput.png}
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-# )
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-# ExternalData_Add_Target(MyData)
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-#
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-# When test ``MyTest`` runs the ``DATA{MyInput.png}`` argument will be
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-# replaced by the full path to a real instance of the data file
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-# ``MyInput.png`` on disk. If the source tree contains a content link
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-# such as ``MyInput.png.md5`` then the ``MyData`` target creates a real
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-# ``MyInput.png`` in the build tree.
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-#
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-# The ``DATA{}`` syntax can be told to fetch a file series using the form
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-# ``DATA{<name>,:}``, where the ``:`` is literal. If the source tree
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-# contains a group of files or content links named like a series then a
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-# reference to one member adds rules to fetch all of them. Although all
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-# members of a series are fetched, only the file originally named by the
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-# ``DATA{}`` argument is substituted for it. The default configuration
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-# recognizes file series names ending with ``#.ext``, ``_#.ext``, ``.#.ext``,
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-# or ``-#.ext`` where ``#`` is a sequence of decimal digits and ``.ext`` is
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-# any single extension. Configure it with a regex that parses ``<number>``
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-# and ``<suffix>`` parts from the end of ``<name>``::
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-#
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-# ExternalData_SERIES_PARSE = regex of the form (<number>)(<suffix>)$
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-#
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-# For more complicated cases set::
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-#
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-# ExternalData_SERIES_PARSE = regex with at least two () groups
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-# ExternalData_SERIES_PARSE_PREFIX = <prefix> regex group number, if any
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-# ExternalData_SERIES_PARSE_NUMBER = <number> regex group number
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-# ExternalData_SERIES_PARSE_SUFFIX = <suffix> regex group number
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-#
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-# Configure series number matching with a regex that matches the
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-# ``<number>`` part of series members named ``<prefix><number><suffix>``::
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-#
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-# ExternalData_SERIES_MATCH = regex matching <number> in all series members
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-#
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-# Note that the ``<suffix>`` of a series does not include a hash-algorithm
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-# extension.
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-#
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-# The ``DATA{}`` syntax can alternatively match files associated with the
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-# named file and contained in the same directory. Associated files may
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-# be specified by options using the syntax
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-# ``DATA{<name>,<opt1>,<opt2>,...}``. Each option may specify one file by
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-# name or specify a regular expression to match file names using the
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-# syntax ``REGEX:<regex>``. For example, the arguments::
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-#
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-# DATA{MyData/MyInput.mhd,MyInput.img} # File pair
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-# DATA{MyData/MyFrames00.png,REGEX:MyFrames[0-9]+\\.png} # Series
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-#
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-# will pass ``MyInput.mha`` and ``MyFrames00.png`` on the command line but
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-# ensure that the associated files are present next to them.
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-#
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-# The ``DATA{}`` syntax may reference a directory using a trailing slash and
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-# a list of associated files. The form ``DATA{<name>/,<opt1>,<opt2>,...}``
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-# adds rules to fetch any files in the directory that match one of the
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-# associated file options. For example, the argument
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-# ``DATA{MyDataDir/,REGEX:.*}`` will pass the full path to a ``MyDataDir``
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-# directory on the command line and ensure that the directory contains
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-# files corresponding to every file or content link in the ``MyDataDir``
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-# source directory.
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-#
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-# The variable ``ExternalData_LINK_CONTENT`` may be set to the name of a
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-# supported hash algorithm to enable automatic conversion of real data
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-# files referenced by the ``DATA{}`` syntax into content links. For each
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-# such ``<file>`` a content link named ``<file><ext>`` is created. The
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-# original file is renamed to the form ``.ExternalData_<algo>_<hash>`` to
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-# stage it for future transmission to one of the locations in the list
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-# of URL templates (by means outside the scope of this module). The
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-# data fetch rule created for the content link will use the staged
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-# object if it cannot be found using any URL template.
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-#
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-# The variable ``ExternalData_OBJECT_STORES`` may be set to a list of local
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-# directories that store objects using the layout ``<dir>/%(algo)/%(hash)``.
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-# These directories will be searched first for a needed object. If the
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-# object is not available in any store then it will be fetched remotely
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-# using the URL templates and added to the first local store listed. If
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-# no stores are specified the default is a location inside the build
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-# tree.
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-#
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-# The variable ``ExternalData_SOURCE_ROOT`` may be set to the highest source
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-# directory containing any path named by a ``DATA{}`` reference. The
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-# default is ``CMAKE_SOURCE_DIR``. ``ExternalData_SOURCE_ROOT`` and
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-# ``CMAKE_SOURCE_DIR`` must refer to directories within a single source
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-# distribution (e.g. they come together in one tarball).
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-#
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-# The variable ``ExternalData_BINARY_ROOT`` may be set to the directory to
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-# hold the real data files named by expanded ``DATA{}`` references. The
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-# default is ``CMAKE_BINARY_DIR``. The directory layout will mirror that of
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-# content links under ``ExternalData_SOURCE_ROOT``.
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-#
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-# Variables ``ExternalData_TIMEOUT_INACTIVITY`` and
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-# ``ExternalData_TIMEOUT_ABSOLUTE`` set the download inactivity and absolute
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-# timeouts, in seconds. The defaults are 60 seconds and 300 seconds,
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-# respectively. Set either timeout to 0 seconds to disable enforcement.
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+#[=======================================================================[.rst:
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+ExternalData
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+------------
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+
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+Manage data files stored outside source tree
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+
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+Use this module to unambiguously reference data files stored outside
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|
|
+the source tree and fetch them at build time from arbitrary local and
|
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|
|
|
+remote content-addressed locations. Functions provided by this module
|
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|
|
|
+recognize arguments with the syntax ``DATA{<name>}`` as references to
|
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+external data, replace them with full paths to local copies of those
|
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+data, and create build rules to fetch and update the local copies.
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+
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+The ``DATA{}`` syntax is literal and the ``<name>`` is a full or relative path
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+within the source tree. The source tree must contain either a real
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+data file at ``<name>`` or a "content link" at ``<name><ext>`` containing a
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+hash of the real file using a hash algorithm corresponding to ``<ext>``.
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+For example, the argument ``DATA{img.png}`` may be satisfied by either a
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+real ``img.png`` file in the current source directory or a ``img.png.md5``
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+file containing its MD5 sum.
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+
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+The ``ExternalData_Expand_Arguments`` function evaluates ``DATA{}``
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+references in its arguments and constructs a new list of arguments:
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+
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+.. code-block:: cmake
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+
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+ ExternalData_Expand_Arguments(
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+ <target> # Name of data management target
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+ <outVar> # Output variable
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+ [args...] # Input arguments, DATA{} allowed
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+ )
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+
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+It replaces each ``DATA{}`` reference in an argument with the full path of
|
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|
|
|
+a real data file on disk that will exist after the ``<target>`` builds.
|
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|
|
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+
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|
|
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+The ``ExternalData_Add_Test`` function wraps around the CMake
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|
|
|
+:command:`add_test` command but supports ``DATA{}`` references in
|
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|
|
+its arguments:
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+
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+.. code-block:: cmake
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+
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+ ExternalData_Add_Test(
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+ <target> # Name of data management target
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+ ... # Arguments of add_test(), DATA{} allowed
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+ )
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+
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+It passes its arguments through ``ExternalData_Expand_Arguments`` and then
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+invokes the :command:`add_test` command using the results.
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|
|
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+
|
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|
|
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+The ``ExternalData_Add_Target`` function creates a custom target to
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|
|
|
+manage local instances of data files stored externally:
|
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|
|
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+
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+.. code-block:: cmake
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+
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+ ExternalData_Add_Target(
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+ <target> # Name of data management target
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+ )
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+
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+It creates custom commands in the target as necessary to make data
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|
|
|
+files available for each ``DATA{}`` reference previously evaluated by
|
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|
|
|
+other functions provided by this module. A list of URL templates may
|
|
|
|
|
+be provided in the variable ``ExternalData_URL_TEMPLATES`` using the
|
|
|
|
|
+placeholders ``%(algo)`` and ``%(hash)`` in each template. Data fetch
|
|
|
|
|
+rules try each URL template in order by substituting the hash
|
|
|
|
|
+algorithm name for ``%(algo)`` and the hash value for ``%(hash)``.
|
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|
|
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+
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+The following hash algorithms are supported::
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+
|
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+ %(algo) <ext> Description
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|
|
|
+ ------- ----- -----------
|
|
|
|
|
+ MD5 .md5 Message-Digest Algorithm 5, RFC 1321
|
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|
|
|
+ SHA1 .sha1 US Secure Hash Algorithm 1, RFC 3174
|
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|
|
|
+ SHA224 .sha224 US Secure Hash Algorithms, RFC 4634
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+ SHA256 .sha256 US Secure Hash Algorithms, RFC 4634
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+ SHA384 .sha384 US Secure Hash Algorithms, RFC 4634
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+ SHA512 .sha512 US Secure Hash Algorithms, RFC 4634
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+
|
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|
|
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+Note that the hashes are used only for unique data identification and
|
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|
|
|
+download verification.
|
|
|
|
|
+
|
|
|
|
|
+Example usage:
|
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|
|
|
+
|
|
|
|
|
+.. code-block:: cmake
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+
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+ include(ExternalData)
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+ set(ExternalData_URL_TEMPLATES "file:///local/%(algo)/%(hash)"
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+ "file:////host/share/%(algo)/%(hash)"
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+ "http://data.org/%(algo)/%(hash)")
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+ ExternalData_Add_Test(MyData
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+ NAME MyTest
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+ COMMAND MyExe DATA{MyInput.png}
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+ )
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+ ExternalData_Add_Target(MyData)
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+
|
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+When test ``MyTest`` runs the ``DATA{MyInput.png}`` argument will be
|
|
|
|
|
+replaced by the full path to a real instance of the data file
|
|
|
|
|
+``MyInput.png`` on disk. If the source tree contains a content link
|
|
|
|
|
+such as ``MyInput.png.md5`` then the ``MyData`` target creates a real
|
|
|
|
|
+``MyInput.png`` in the build tree.
|
|
|
|
|
+
|
|
|
|
|
+The ``DATA{}`` syntax can be told to fetch a file series using the form
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|
|
|
|
+``DATA{<name>,:}``, where the ``:`` is literal. If the source tree
|
|
|
|
|
+contains a group of files or content links named like a series then a
|
|
|
|
|
+reference to one member adds rules to fetch all of them. Although all
|
|
|
|
|
+members of a series are fetched, only the file originally named by the
|
|
|
|
|
+``DATA{}`` argument is substituted for it. The default configuration
|
|
|
|
|
+recognizes file series names ending with ``#.ext``, ``_#.ext``, ``.#.ext``,
|
|
|
|
|
+or ``-#.ext`` where ``#`` is a sequence of decimal digits and ``.ext`` is
|
|
|
|
|
+any single extension. Configure it with a regex that parses ``<number>``
|
|
|
|
|
+and ``<suffix>`` parts from the end of ``<name>``::
|
|
|
|
|
+
|
|
|
|
|
+ ExternalData_SERIES_PARSE = regex of the form (<number>)(<suffix>)$
|
|
|
|
|
+
|
|
|
|
|
+For more complicated cases set::
|
|
|
|
|
+
|
|
|
|
|
+ ExternalData_SERIES_PARSE = regex with at least two () groups
|
|
|
|
|
+ ExternalData_SERIES_PARSE_PREFIX = <prefix> regex group number, if any
|
|
|
|
|
+ ExternalData_SERIES_PARSE_NUMBER = <number> regex group number
|
|
|
|
|
+ ExternalData_SERIES_PARSE_SUFFIX = <suffix> regex group number
|
|
|
|
|
+
|
|
|
|
|
+Configure series number matching with a regex that matches the
|
|
|
|
|
+``<number>`` part of series members named ``<prefix><number><suffix>``::
|
|
|
|
|
+
|
|
|
|
|
+ ExternalData_SERIES_MATCH = regex matching <number> in all series members
|
|
|
|
|
+
|
|
|
|
|
+Note that the ``<suffix>`` of a series does not include a hash-algorithm
|
|
|
|
|
+extension.
|
|
|
|
|
+
|
|
|
|
|
+The ``DATA{}`` syntax can alternatively match files associated with the
|
|
|
|
|
+named file and contained in the same directory. Associated files may
|
|
|
|
|
+be specified by options using the syntax
|
|
|
|
|
+``DATA{<name>,<opt1>,<opt2>,...}``. Each option may specify one file by
|
|
|
|
|
+name or specify a regular expression to match file names using the
|
|
|
|
|
+syntax ``REGEX:<regex>``. For example, the arguments::
|
|
|
|
|
+
|
|
|
|
|
+ DATA{MyData/MyInput.mhd,MyInput.img} # File pair
|
|
|
|
|
+ DATA{MyData/MyFrames00.png,REGEX:MyFrames[0-9]+\\.png} # Series
|
|
|
|
|
+
|
|
|
|
|
+will pass ``MyInput.mha`` and ``MyFrames00.png`` on the command line but
|
|
|
|
|
+ensure that the associated files are present next to them.
|
|
|
|
|
+
|
|
|
|
|
+The ``DATA{}`` syntax may reference a directory using a trailing slash and
|
|
|
|
|
+a list of associated files. The form ``DATA{<name>/,<opt1>,<opt2>,...}``
|
|
|
|
|
+adds rules to fetch any files in the directory that match one of the
|
|
|
|
|
+associated file options. For example, the argument
|
|
|
|
|
+``DATA{MyDataDir/,REGEX:.*}`` will pass the full path to a ``MyDataDir``
|
|
|
|
|
+directory on the command line and ensure that the directory contains
|
|
|
|
|
+files corresponding to every file or content link in the ``MyDataDir``
|
|
|
|
|
+source directory.
|
|
|
|
|
+
|
|
|
|
|
+The variable ``ExternalData_LINK_CONTENT`` may be set to the name of a
|
|
|
|
|
+supported hash algorithm to enable automatic conversion of real data
|
|
|
|
|
+files referenced by the ``DATA{}`` syntax into content links. For each
|
|
|
|
|
+such ``<file>`` a content link named ``<file><ext>`` is created. The
|
|
|
|
|
+original file is renamed to the form ``.ExternalData_<algo>_<hash>`` to
|
|
|
|
|
+stage it for future transmission to one of the locations in the list
|
|
|
|
|
+of URL templates (by means outside the scope of this module). The
|
|
|
|
|
+data fetch rule created for the content link will use the staged
|
|
|
|
|
+object if it cannot be found using any URL template.
|
|
|
|
|
+
|
|
|
|
|
+The variable ``ExternalData_OBJECT_STORES`` may be set to a list of local
|
|
|
|
|
+directories that store objects using the layout ``<dir>/%(algo)/%(hash)``.
|
|
|
|
|
+These directories will be searched first for a needed object. If the
|
|
|
|
|
+object is not available in any store then it will be fetched remotely
|
|
|
|
|
+using the URL templates and added to the first local store listed. If
|
|
|
|
|
+no stores are specified the default is a location inside the build
|
|
|
|
|
+tree.
|
|
|
|
|
+
|
|
|
|
|
+The variable ``ExternalData_SOURCE_ROOT`` may be set to the highest source
|
|
|
|
|
+directory containing any path named by a ``DATA{}`` reference. The
|
|
|
|
|
+default is ``CMAKE_SOURCE_DIR``. ``ExternalData_SOURCE_ROOT`` and
|
|
|
|
|
+``CMAKE_SOURCE_DIR`` must refer to directories within a single source
|
|
|
|
|
+distribution (e.g. they come together in one tarball).
|
|
|
|
|
+
|
|
|
|
|
+The variable ``ExternalData_BINARY_ROOT`` may be set to the directory to
|
|
|
|
|
+hold the real data files named by expanded ``DATA{}`` references. The
|
|
|
|
|
+default is ``CMAKE_BINARY_DIR``. The directory layout will mirror that of
|
|
|
|
|
+content links under ``ExternalData_SOURCE_ROOT``.
|
|
|
|
|
+
|
|
|
|
|
+Variables ``ExternalData_TIMEOUT_INACTIVITY`` and
|
|
|
|
|
+``ExternalData_TIMEOUT_ABSOLUTE`` set the download inactivity and absolute
|
|
|
|
|
+timeouts, in seconds. The defaults are 60 seconds and 300 seconds,
|
|
|
|
|
+respectively. Set either timeout to 0 seconds to disable enforcement.
|
|
|
|
|
+#]=======================================================================]
|
|
|
|
|
|
|
|
#=============================================================================
|
|
#=============================================================================
|
|
|
-# Copyright 2010-2013 Kitware, Inc.
|
|
|
|
|
|
|
+# Copyright 2010-2015 Kitware, Inc.
|
|
|
#
|
|
#
|
|
|
# Distributed under the OSI-approved BSD License (the "License");
|
|
# Distributed under the OSI-approved BSD License (the "License");
|
|
|
# see accompanying file Copyright.txt for details.
|
|
# see accompanying file Copyright.txt for details.
|